Preprints

• Ayati, M., Yilmaz, S., Chance M. R., Koyutürk M. (2021). Constructing Functional Networks of Phosphorylation Sites Using Co-Phosphorylation. Preprint in biorXiv. Download PDF

Publications

• Yılmaz S., Ayati M., Schlatzer, Çiçek A. E., Chance M. R., Koyutürk M. (2021) Robust inference of kinase activity using functional networks. Nature Communications, 12 (1117). Download PDF, View Short Summary
  • Conference Version: RECOMB 2021 (Best Paper Award)
• Yilmaz, S., Fakhouri, M., Koyuturk, M., Cicek, A. E. and Tastan, O. (2021). Uncovering complementary sets of variants for predicting quantitative phenotypes. Bioinformatics. Download PDF
• Hacialiefendioglu, A. M., Yilmaz, S. S., D Smith, J Whiting , Koyuturk, M. & Karakurt, G. (2021). Data driven identification of subtypes of intimate partner violence. Scientific Reports.
• Yılmaz, S., Alghamdi, B., Singuri, S., Hacialiefendioglu, A. M., Özcan, T., Koyutürk, M., & Karakurt, G. (2020). Identifying health correlates of intimate partner violence against pregnant women. Health Information Science and Systems.
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• Yilmaz, S., Tastan, O., & Cicek, E. (2019) Spadis: An algorithm for selecting predictive and diverse snps in GWAS. IEEE/ACM transactions on computational biology and bioinformatics. Download PDF

Peer-Reviewed Conference Proceedings

• Hacialiefendioglu, A. M., Yılmaz, S., Koyutürk, M., & Karakurt, G. (2020). Co-occurrence Patterns of Intimate Partner Violence. Proceedings of the Pacific Symposium on Biocomputing 2021, pp. 79-90. Download PDF